PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G127300.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 345aa    MW: 37959.1 Da    PI: 7.4246
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G127300.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.72.8e-052322721055
                        HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        + R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  Aqcoe6G127300.3.p 232 KVRKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 272
                        67888999***********98.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.407222271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-11231285IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.27E-5232276No hitNo description
Gene3DG3DSA:4.10.280.108.3E-9236279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MIQDLGYPNW VTNNFTNQSA HDLHLAKIKE ELSESAISCS SSSPEDYHLP STSYIRHDHR  60
GDIHDLNENI FLKNFSSNCQ LNELQGGSLY SNSSQSTPSF GGLATPNRGN FSQIFPTANI  120
SNPNSSFLSS SGMNLQVLDL LTSTNFSGGF NHQLAHNNLG LFKEAPSFSH DHLKEPSHWL  180
TNSHNKVSSF INGVTETKRS NSSVSEAKAS HTASKKPRLE SRSSLAPFKV GKVRKEKLGD  240
RIAALQQLVA PFGKTDTASV LMEAIGYIKF LQDQVETLSV PYMKPSRNNT RRSIQEGSME  300
DVDEEQKRDL RSRGLCLVPL SCMSYITNDN IGGWPSASDF GGRN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002281118.21e-122PREDICTED: transcription factor bHLH110 isoform X2
TrEMBLA5C1E11e-122A5C1E1_VITVI; Putative uncharacterized protein
TrEMBLE0CQH41e-122E0CQH4_VITVI; Putative uncharacterized protein
STRINGVIT_18s0001g12970.t011e-122(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.13e-57bHLH family protein